Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolipoprotein diacylglyceryltransferase | SAMN04488524_4605 | Not Available | Negative | 5440747 - 5441487 | 28096.6 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN04488524_4606 | Not Available | Negative | 5441498 - 5442340 | 32098.8 |
| dna replication and repair protein radc | SAMN04488524_4607 | Not Available | Negative | 5442364 - 5443062 | 25651.5 |
| ssu ribosomal protein s20p | SAMN04488524_4608 | Not Available | Negative | 5443134 - 5443388 | 9642.07 |
| hypothetical protein | SAMN04488524_4609 | Not Available | Positive | 5443524 - 5443874 | 13048.6 |
| hypothetical protein | SAMN04488524_4610 | Not Available | Negative | 5443947 - 5444549 | 21246.8 |
| superoxide dismutase, fe-mn family | SAMN04488524_4611 | Not Available | Negative | 5444708 - 5445421 | 26338.8 |
| formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase | SAMN04488524_4612 | Not Available | Positive | 5445555 - 5446133 | 22156.0 |
| conserved hypothetical protein, hne_0200 family | SAMN04488524_4613 | Not Available | Negative | 5446135 - 5447199 | 39655.8 |
| parallel beta-helix repeat-containing protein | SAMN04488524_4614 | Not Available | Negative | 5447210 - 5448493 | 46485.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

