Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, deor family | SAMN04488524_4585 | Not Available | Positive | 5416816 - 5417565 | 27678.8 |
| hypothetical protein | SAMN04488524_4586 | Not Available | Negative | 5417590 - 5418201 | 24385.3 |
| predicted ntp pyrophosphohydrolase, nudix family | SAMN04488524_4587 | Not Available | Positive | 5418308 - 5418772 | 17798.0 |
| hypothetical protein | SAMN04488524_4588 | Not Available | Negative | 5418808 - 5419806 | 37304.5 |
| transcriptional regulator, arac family | SAMN04488524_4589 | Not Available | Negative | 5419923 - 5420741 | 31580.3 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488524_4590 | Not Available | Negative | 5420729 - 5421757 | 36852.9 |
| 3-phytase | SAMN04488524_4591 | Not Available | Negative | 5421820 - 5422884 | 39531.9 |
| hypothetical protein | SAMN04488524_4592 | Not Available | Negative | 5422909 - 5424162 | 44999.1 |
| tonb-dependent receptor | SAMN04488524_4593 | Not Available | Negative | 5424192 - 5426960 | 103705.0 |
| tetratricopeptide repeat-containing protein | SAMN04488524_4594 | Not Available | Negative | 5427206 - 5428789 | 61146.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

