Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-xylosidase, gh43 family | SAMN04488524_4575 | Not Available | Negative | 5400279 - 5401325 | 38781.8 |
| alpha-n-acetylglucosaminidase | SAMN04488524_4576 | Not Available | Negative | 5401333 - 5403573 | 86599.2 |
| glucose/galactose transporter | SAMN04488524_4577 | Not Available | Negative | 5403607 - 5404875 | 45477.0 |
| hypothetical protein | SAMN04488524_4578 | Not Available | Negative | 5404883 - 5406535 | 60513.7 |
| hexosaminidase | SAMN04488524_4579 | Not Available | Negative | 5406551 - 5408386 | 69543.1 |
| n-acetylmuramic acid 6-phosphate etherase | SAMN04488524_4580 | Not Available | Negative | 5408412 - 5409230 | 29334.6 |
| arabinan endo-1,5-alpha-l-arabinosidase | SAMN04488524_4581 | Not Available | Negative | 5409276 - 5410343 | 38826.0 |
| tachylectin | SAMN04488524_4582 | Not Available | Negative | 5410364 - 5411566 | 43467.2 |
| starch-binding associating with outer membrane | SAMN04488524_4583 | Not Available | Negative | 5411600 - 5413408 | 68536.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_4584 | Not Available | Negative | 5413416 - 5416454 | 111952.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

