Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| competence protein comea helix-hairpin-helix repeat region | SAMN04488524_4564 | Not Available | Negative | 5392302 - 5393201 | 35057.1 |
| putative hemolysin | SAMN04488524_4565 | Not Available | Positive | 5393372 - 5395123 | 66907.7 |
| hypothetical protein | SAMN04488524_4566 | Not Available | Negative | 5395120 - 5395260 | 5176.03 |
| hypothetical protein | SAMN04488524_4567 | Not Available | Positive | 5395605 - 5397140 | 56098.7 |
| putative intracellular protease/amidase | SAMN04488524_4568 | Not Available | Negative | 5397167 - 5397934 | 27947.5 |
| cyclic nucleotide-binding domain-containing protein | SAMN04488524_4569 | Not Available | Negative | 5397997 - 5398413 | 16259.5 |
| hypothetical protein | SAMN04488524_4570 | Not Available | Negative | 5398567 - 5398797 | 8682.45 |
| hypothetical protein | SAMN04488524_4572 | Not Available | Negative | 5399116 - 5399373 | 9502.61 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_4573 | Not Available | Negative | 5399383 - 5399916 | 20443.5 |
| cold shock protein (beta-ribbon, cspa family) | SAMN04488524_4574 | Not Available | Positive | 5400085 - 5400276 | 7010.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

