Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta' | SAMN04488524_4544 | Not Available | Negative | 5374940 - 5379226 | 159803.0 |
| dna-directed rna polymerase subunit beta | SAMN04488524_4545 | Not Available | Negative | 5379268 - 5383071 | 142252.0 |
| large subunit ribosomal protein l7/l12 | SAMN04488524_4546 | Not Available | Negative | 5383226 - 5383603 | 12906.6 |
| lsu ribosomal protein l10p | SAMN04488524_4547 | Not Available | Negative | 5383667 - 5384188 | 18664.7 |
| large subunit ribosomal protein l1 | SAMN04488524_4548 | Not Available | Negative | 5384191 - 5384889 | 24534.0 |
| lsu ribosomal protein l11p | SAMN04488524_4549 | Not Available | Negative | 5384913 - 5385356 | 15579.9 |
| transcription antitermination protein nusg | SAMN04488524_4550 | Not Available | Negative | 5385421 - 5385963 | 20579.2 |
| preprotein translocase subunit sece | SAMN04488524_4551 | Not Available | Negative | 5385973 - 5386170 | 7317.97 |
| Trna-trp | Not Available | Not Available | Positive | 5386181 - 5386254 | Not Available |
| elongation factor tu | SAMN04488524_4553 | Not Available | Negative | 5386365 - 5387552 | 43000.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

