Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN04488524_0421 | Not Available | Negative | 568041 - 568430 | 14955.3 |
| hypothetical protein | SAMN04488524_0422 | Not Available | Negative | 568566 - 569012 | 16600.2 |
| prolyl oligopeptidase family protein | SAMN04488524_0423 | Not Available | Negative | 569017 - 571962 | 111484.0 |
| protein of unknown function, duf255 | SAMN04488524_0424 | Not Available | Negative | 572005 - 573402 | 53334.6 |
| protein of unknown function | SAMN04488524_0425 | Not Available | Negative | 573426 - 574103 | 24455.5 |
| ragb/susd domain-containing protein | SAMN04488524_0426 | Not Available | Negative | 574150 - 575616 | 54402.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_0427 | Not Available | Negative | 575652 - 579032 | 123819.0 |
| fecr family protein | SAMN04488524_0428 | Not Available | Negative | 579295 - 580437 | 41177.9 |
| rna polymerase sigma-70 factor, bacteroides expansion family 1 | SAMN04488524_0429 | Not Available | Negative | 580533 - 581117 | 22675.2 |
| dna-binding protein hu-beta | SAMN04488524_0430 | Not Available | Negative | 581296 - 581586 | 10714.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

