Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat shock protein hsp15 | SAMN04488524_4534 | Not Available | Negative | 5367023 - 5367421 | 15154.4 |
| 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase | SAMN04488524_4535 | Not Available | Positive | 5367496 - 5368314 | 29546.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488524_4536 | Not Available | Positive | 5368315 - 5369253 | 36422.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488524_4537 | Not Available | Positive | 5369264 - 5370070 | 30806.2 |
| n-terminal domain of galactosyltransferase | SAMN04488524_4538 | Not Available | Positive | 5370067 - 5370888 | 31456.0 |
| l-threonylcarbamoyladenylate synthase | SAMN04488524_4539 | Not Available | Positive | 5370901 - 5371467 | 20780.0 |
| hdig domain-containing protein | SAMN04488524_4540 | Not Available | Positive | 5371494 - 5372900 | 53718.3 |
| pria4b orf-3-like protein | SAMN04488524_4541 | Not Available | Positive | 5372958 - 5373608 | 25154.6 |
| trna dimethylallyltransferase | SAMN04488524_4542 | Not Available | Positive | 5373618 - 5374526 | 34316.2 |
| protein of unknown function | SAMN04488524_4543 | Not Available | Negative | 5374523 - 5374837 | 11551.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

