Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function duf58 | SAMN04488524_4524 | Not Available | Negative | 5354999 - 5355952 | 37095.8 |
| thioredoxin | SAMN04488524_4525 | Not Available | Negative | 5355985 - 5356302 | 11650.1 |
| dna polymerase iii, alpha subunit | SAMN04488524_4526 | Not Available | Negative | 5356437 - 5360867 | 167067.0 |
| apolipoprotein d and lipocalin family protein | SAMN04488524_4527 | Not Available | Negative | 5360944 - 5361429 | 19078.0 |
| malate dehydrogenase (nad) | SAMN04488524_4528 | Not Available | Positive | 5361580 - 5362512 | 32704.6 |
| aspartyl protease | SAMN04488524_4529 | Not Available | Positive | 5362529 - 5362954 | 15534.0 |
| dna gyrase subunit b | SAMN04488524_4530 | Not Available | Negative | 5362985 - 5364943 | 72213.1 |
| periplasmic chaperone for outer membrane proteins skp | SAMN04488524_4531 | Not Available | Positive | 5365134 - 5365730 | 21875.8 |
| trna(arg) a34 adenosine deaminase tada | SAMN04488524_4532 | Not Available | Positive | 5365797 - 5366279 | 17845.7 |
| ecsc protein family protein | SAMN04488524_4533 | Not Available | Positive | 5366289 - 5367026 | 28101.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

