Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin q/bcp | SAMN04488524_4514 | Not Available | Positive | 5345477 - 5345938 | 17044.2 |
| protein of unknown function | SAMN04488524_4515 | Not Available | Negative | 5346151 - 5347047 | 33997.6 |
| signal transduction histidine kinase | SAMN04488524_4516 | Not Available | Negative | 5347128 - 5348690 | 58200.2 |
| glucose/galactose transporter | SAMN04488524_4517 | Not Available | Negative | 5348876 - 5350162 | 46335.6 |
| transketolase | SAMN04488524_4518 | Not Available | Positive | 5350412 - 5351257 | 30629.5 |
| transketolase | SAMN04488524_4519 | Not Available | Positive | 5351260 - 5352219 | 34676.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_4520 | Not Available | Positive | 5352237 - 5352797 | 21802.1 |
| hypothetical protein | SAMN04488524_4521 | Not Available | Positive | 5352832 - 5353326 | 18775.1 |
| hypothetical protein | SAMN04488524_4522 | Not Available | Positive | 5353304 - 5353795 | 19830.3 |
| acetylornithine/succinyldiaminopimelate/ putresci ne aminotransferase | SAMN04488524_4523 | Not Available | Positive | 5353812 - 5355002 | 43161.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

