Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_4494 | Not Available | Negative | 5323647 - 5324444 | 29727.1 |
| nad+ kinase | SAMN04488524_4495 | Not Available | Negative | 5324446 - 5325327 | 33000.7 |
| cbs domain-containing protein | SAMN04488524_4496 | Not Available | Negative | 5325358 - 5326020 | 24524.3 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488524_4497 | Not Available | Negative | 5326020 - 5326784 | 28853.1 |
| hypothetical protein | SAMN04488524_4498 | Not Available | Negative | 5326893 - 5327339 | 16294.1 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04488524_4499 | Not Available | Negative | 5327351 - 5328127 | 28432.8 |
| probable protein-translocating porin port | SAMN04488524_4500 | Not Available | Negative | 5328173 - 5328901 | 27648.3 |
| demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | SAMN04488524_4501 | Not Available | Negative | 5328912 - 5329643 | 27581.4 |
| gtp-binding protein | SAMN04488524_4502 | Not Available | Positive | 5329696 - 5330325 | 23683.8 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN04488524_4503 | Not Available | Positive | 5330340 - 5331206 | 32381.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

