Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04488524_4474 | Not Available | Negative | 5299966 - 5301033 | 39855.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_4475 | Not Available | Negative | 5301100 - 5301636 | 21240.8 |
| hypothetical protein | SAMN04488524_4476 | Not Available | Negative | 5301710 - 5302021 | 11676.3 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN04488524_4477 | Not Available | Negative | 5302110 - 5303585 | 52990.6 |
| k(+)-stimulated pyrophosphate-energized sodium pump | SAMN04488524_4478 | Not Available | Positive | 5303927 - 5306224 | 79332.8 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN04488524_4479 | Not Available | Positive | 5306387 - 5308084 | 60877.8 |
| hypothetical protein | SAMN04488524_4480 | Not Available | Negative | 5308151 - 5308357 | 7701.65 |
| multiple antibiotic resistance protein | SAMN04488524_4481 | Not Available | Positive | 5308512 - 5309081 | 20528.2 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN04488524_4482 | Not Available | Negative | 5309085 - 5310248 | 44988.9 |
| hypothetical protein | SAMN04488524_4483 | Not Available | Negative | 5310245 - 5311471 | 46143.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

