Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxyl-terminal processing protease | SAMN04488524_4464 | Not Available | Negative | 5286969 - 5289044 | 76783.4 |
| serine protease do | SAMN04488524_4465 | Not Available | Negative | 5289051 - 5290712 | 59221.4 |
| hypothetical protein | SAMN04488524_4466 | Not Available | Positive | 5290810 - 5291265 | 16712.2 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN04488524_4467 | Not Available | Negative | 5291347 - 5291895 | 19233.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_4468 | Not Available | Positive | 5292007 - 5292555 | 20700.1 |
| anti-sigma-k factor rska | SAMN04488524_4469 | Not Available | Positive | 5292557 - 5293387 | 30581.2 |
| ferritin-like domain-containing protein | SAMN04488524_4470 | Not Available | Negative | 5293458 - 5294306 | 29870.9 |
| ferritin-like domain-containing protein | SAMN04488524_4471 | Not Available | Negative | 5294318 - 5295007 | 24493.2 |
| starch-binding associating with outer membrane | SAMN04488524_4472 | Not Available | Negative | 5295091 - 5296608 | 55575.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_4473 | Not Available | Negative | 5296632 - 5299946 | 120190.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

