Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-5 sterol desaturase | SAMN04488524_4454 | Not Available | Negative | 5273731 - 5274498 | 30432.4 |
| peroxiredoxin | SAMN04488524_4455 | Not Available | Negative | 5274498 - 5275652 | 43060.1 |
| lea14-like dessication related protein | SAMN04488524_4456 | Not Available | Positive | 5275751 - 5276239 | 18247.8 |
| peroxiredoxin | SAMN04488524_4457 | Not Available | Negative | 5276236 - 5278152 | 71098.3 |
| hypothetical protein | SAMN04488524_4458 | Not Available | Negative | 5278157 - 5278981 | 31274.4 |
| susd family protein | SAMN04488524_4459 | Not Available | Negative | 5278991 - 5280418 | 53294.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_4460 | Not Available | Negative | 5280429 - 5283992 | 130845.0 |
| peroxiredoxin | SAMN04488524_4461 | Not Available | Negative | 5284023 - 5285162 | 41766.6 |
| fecr family protein | SAMN04488524_4462 | Not Available | Negative | 5285260 - 5286387 | 42598.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_4463 | Not Available | Negative | 5286394 - 5286942 | 21208.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

