Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488524_4444 | Not Available | Negative | 5265232 - 5265483 | 9498.57 |
| atp-independent rna helicase dbpa | SAMN04488524_4445 | Not Available | Negative | 5265485 - 5266792 | 48456.2 |
| hypothetical protein | SAMN04488524_4446 | Not Available | Negative | 5266819 - 5267088 | 10624.3 |
| hypothetical protein | SAMN04488524_4447 | Not Available | Positive | 5267260 - 5267733 | 17758.6 |
| protein of unknown function | SAMN04488524_4448 | Not Available | Negative | 5267734 - 5268288 | 20626.0 |
| putative beta-barrel porin-2, ompl-like. bbp2 | SAMN04488524_4449 | Not Available | Negative | 5268377 - 5269435 | 37256.9 |
| ammonium transporter | SAMN04488524_4450 | Not Available | Negative | 5269488 - 5270864 | 48743.3 |
| hypothetical protein | SAMN04488524_4451 | Not Available | Negative | 5271212 - 5272168 | 36457.0 |
| hypothetical protein | SAMN04488524_4452 | Not Available | Negative | 5272206 - 5272751 | 20645.3 |
| ompa-ompf porin, oop family | SAMN04488524_4453 | Not Available | Negative | 5272799 - 5273329 | 18934.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

