Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine c-acetyltransferase | SAMN04488524_0411 | Not Available | Negative | 556111 - 557379 | 47030.6 |
| hypothetical protein | SAMN04488524_0412 | Not Available | Negative | 557690 - 557983 | 11086.3 |
| hypothetical protein | SAMN04488524_0413 | Not Available | Negative | 558223 - 558432 | 8095.71 |
| hypothetical protein | SAMN04488524_0414 | Not Available | Negative | 558463 - 558672 | 7886.63 |
| alpha-l-arabinofuranosidase | SAMN04488524_0415 | Not Available | Negative | 558897 - 560867 | 72985.2 |
| hypothetical protein | SAMN04488524_0416 | Not Available | Positive | 561182 - 561655 | 18217.3 |
| hypothetical protein | SAMN04488524_0417 | Not Available | Positive | 561645 - 562172 | 20736.9 |
| kap family p-loop domain-containing protein | SAMN04488524_0418 | Not Available | Negative | 562180 - 563706 | 58887.5 |
| aaa domain-containing protein, putative abieii toxin, type iv ta system | SAMN04488524_0419 | Not Available | Negative | 563735 - 565339 | 61154.9 |
| kap family p-loop domain-containing protein | SAMN04488524_0420 | Not Available | Negative | 565370 - 567994 | 102297.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

