Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_4424 | Not Available | Negative | 5244493 - 5245065 | 22480.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_4425 | Not Available | Positive | 5245172 - 5245744 | 22291.2 |
| fecr family protein | SAMN04488524_4426 | Not Available | Positive | 5245824 - 5247008 | 43454.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_4427 | Not Available | Positive | 5247215 - 5250511 | 120031.0 |
| susd family protein | SAMN04488524_4428 | Not Available | Positive | 5250523 - 5251992 | 53900.0 |
| calcineurin-like phosphoesterase | SAMN04488524_4429 | Not Available | Positive | 5251996 - 5253111 | 42079.5 |
| hypothetical protein | SAMN04488524_4430 | Not Available | Negative | 5253101 - 5253475 | 14133.1 |
| hypothetical protein | SAMN04488524_4431 | Not Available | Negative | 5253485 - 5254012 | 20533.2 |
| dna-binding transcriptional regulator, fadr family | SAMN04488524_4432 | Not Available | Positive | 5254113 - 5254778 | 24927.5 |
| mfs transporter, fsr family, fosmidomycin resistance protein | SAMN04488524_4433 | Not Available | Positive | 5254783 - 5256009 | 44277.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

