Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imp dehydrogenase | SAMN04488524_4414 | Not Available | Positive | 5228835 - 5230304 | 52466.6 |
| hypothetical protein | SAMN04488524_4415 | Not Available | Negative | 5230352 - 5231065 | 27298.5 |
| signal transduction histidine kinase | SAMN04488524_4416 | Not Available | Negative | 5231085 - 5233079 | 74064.8 |
| putative abc transport system permease protein | SAMN04488524_4417 | Not Available | Negative | 5233160 - 5235754 | 95486.0 |
| putative abc transport system atp-binding protein | SAMN04488524_4418 | Not Available | Negative | 5235747 - 5236433 | 24784.7 |
| acyl-coa thioesterase-1 | SAMN04488524_4419 | Not Available | Positive | 5236554 - 5237231 | 23956.2 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488524_4420 | Not Available | Negative | 5237244 - 5238329 | 40003.4 |
| susd family protein | SAMN04488524_4421 | Not Available | Negative | 5238384 - 5239835 | 54615.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_4422 | Not Available | Negative | 5239837 - 5243166 | 122915.0 |
| fecr family protein | SAMN04488524_4423 | Not Available | Negative | 5243302 - 5244444 | 42293.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

