Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_4404 | Not Available | Positive | 5214981 - 5215109 | 5134.3 |
| hypothetical protein | SAMN04488524_4405 | Not Available | Positive | 5215154 - 5215291 | 5449.9 |
| two component regulator propeller | SAMN04488524_4406 | Not Available | Negative | 5215330 - 5218287 | 113817.0 |
| two component transcriptional regulator, lyttr family | SAMN04488524_4407 | Not Available | Negative | 5218290 - 5219057 | 29142.7 |
| de-hypoxanthine futalosine cyclase | SAMN04488524_4408 | Not Available | Negative | 5219117 - 5220241 | 42232.7 |
| predicted zn-dependent peptidase | SAMN04488524_4409 | Not Available | Positive | 5220354 - 5221598 | 46980.0 |
| predicted zn-dependent peptidase | SAMN04488524_4410 | Not Available | Positive | 5221591 - 5222865 | 47192.3 |
| protein of unknown function | SAMN04488524_4411 | Not Available | Negative | 5222878 - 5224773 | 71845.0 |
| protein of unknown function | SAMN04488524_4412 | Not Available | Negative | 5224777 - 5226780 | 76457.0 |
| outer membrane protein assembly factor bamb, contains pqq-like beta-propeller repeat | SAMN04488524_4413 | Not Available | Negative | 5226839 - 5228674 | 67577.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

