Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase iscs | SAMN04488524_4394 | Not Available | Negative | 5206784 - 5207995 | 44362.2 |
| methylmalonyl-coa epimerase | SAMN04488524_4395 | Not Available | Positive | 5208121 - 5208522 | 14625.6 |
| lsu ribosomal protein l31p | SAMN04488524_4396 | Not Available | Positive | 5208612 - 5208860 | 9720.6 |
| udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase | SAMN04488524_4397 | Not Available | Positive | 5208931 - 5210106 | 43499.6 |
| triosephosphate isomerase | SAMN04488524_4398 | Not Available | Positive | 5210166 - 5210927 | 27488.0 |
| ribosomal protein l11 methyltransferase | SAMN04488524_4399 | Not Available | Positive | 5210928 - 5211767 | 31414.2 |
| udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase | SAMN04488524_4400 | Not Available | Positive | 5211794 - 5213161 | 51229.0 |
| helix-turn-helix domain-containing protein | SAMN04488524_4401 | Not Available | Positive | 5213190 - 5213519 | 12540.2 |
| hypothetical protein | SAMN04488524_4402 | Not Available | Negative | 5213521 - 5214639 | 43228.9 |
| hypothetical protein | SAMN04488524_4403 | Not Available | Negative | 5214713 - 5214904 | 7250.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

