Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l34p | SAMN04488524_4374 | Not Available | Positive | 5188453 - 5188611 | 6148.54 |
| ribonuclease p protein component | SAMN04488524_4375 | Not Available | Positive | 5188676 - 5189089 | 16130.8 |
| hypothetical protein | SAMN04488524_4376 | Not Available | Positive | 5189091 - 5189306 | 8048.0 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | SAMN04488524_4377 | Not Available | Positive | 5189331 - 5190017 | 24351.4 |
| hypothetical protein | SAMN04488524_4378 | Not Available | Negative | 5190018 - 5191448 | 53967.9 |
| hypothetical protein | SAMN04488524_4379 | Not Available | Negative | 5191464 - 5193038 | 59890.7 |
| uncharacterized membrane protein ygdd, tmem256/duf423 family | SAMN04488524_4380 | Not Available | Positive | 5193180 - 5193569 | 14290.8 |
| replication restart dna helicase pria | SAMN04488524_4381 | Not Available | Positive | 5193581 - 5196043 | 93833.4 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN04488524_4382 | Not Available | Positive | 5196145 - 5196801 | 24555.7 |
| ssra-binding protein | SAMN04488524_4383 | Not Available | Negative | 5196802 - 5197251 | 17554.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

