Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_4354 | Not Available | Negative | 5165865 - 5166050 | 7051.62 |
| dihydrofolate reductase | SAMN04488524_4355 | Not Available | Positive | 5166121 - 5166687 | 21306.5 |
| signal transduction histidine kinase | SAMN04488524_4356 | Not Available | Positive | 5166835 - 5168160 | 48816.4 |
| hypothetical protein | SAMN04488524_4357 | Not Available | Negative | 5168186 - 5169181 | 36314.3 |
| hypothetical protein | SAMN04488524_4358 | Not Available | Negative | 5169212 - 5170321 | 41227.5 |
| hypothetical protein | SAMN04488524_4359 | Not Available | Negative | 5170331 - 5171041 | 26244.4 |
| chey chemotaxis protein or a chey-like rec (receiver) domain | SAMN04488524_4360 | Not Available | Negative | 5171129 - 5171539 | 15569.2 |
| response regulator receiver domain-containing protein | SAMN04488524_4361 | Not Available | Negative | 5171529 - 5172437 | 34515.2 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488524_4362 | Not Available | Negative | 5172622 - 5174826 | 83344.6 |
| hypothetical protein | SAMN04488524_4363 | Not Available | Negative | 5174823 - 5175539 | 26139.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

