Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase-peroxidase | SAMN04488524_4344 | Not Available | Negative | 5155594 - 5157867 | 82857.0 |
| putative hydrolase of the had superfamily | SAMN04488524_4345 | Not Available | Negative | 5158027 - 5158677 | 25063.7 |
| Trna-met | Not Available | Not Available | Positive | 5158731 - 5158804 | Not Available |
| atp-binding cassette, subfamily f, member 3 | SAMN04488524_4347 | Not Available | Positive | 5158940 - 5160574 | 61866.4 |
| cytosine/adenosine deaminase | SAMN04488524_4348 | Not Available | Positive | 5160818 - 5162155 | 48097.2 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN04488524_4349 | Not Available | Positive | 5162253 - 5162708 | 17379.9 |
| purple acid phosphatase, n-terminal domain | SAMN04488524_4350 | Not Available | Positive | 5162782 - 5163993 | 45637.6 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488524_4351 | Not Available | Positive | 5163996 - 5164598 | 22966.1 |
| transporter family-2 protein | SAMN04488524_4352 | Not Available | Positive | 5164656 - 5165105 | 15890.3 |
| acetyltransferase (gnat) family protein | SAMN04488524_4353 | Not Available | Positive | 5165102 - 5165851 | 28159.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

