Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase | SAMN04488524_4334 | Not Available | Negative | 5143909 - 5145111 | 44359.2 |
| protein of unknown function | SAMN04488524_4335 | Not Available | Negative | 5145219 - 5145611 | 13994.1 |
| pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (e1) component | SAMN04488524_4336 | Not Available | Positive | 5145819 - 5148242 | 89504.2 |
| chorismate synthase | SAMN04488524_4337 | Not Available | Negative | 5148279 - 5149367 | 38660.0 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN04488524_4338 | Not Available | Negative | 5149370 - 5150629 | 46186.6 |
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | SAMN04488524_4339 | Not Available | Negative | 5150632 - 5151771 | 41859.7 |
| prephenate dehydratase | SAMN04488524_4340 | Not Available | Negative | 5151819 - 5152652 | 31716.3 |
| 3-dehydroquinate synthase | SAMN04488524_4341 | Not Available | Negative | 5152975 - 5154045 | 39671.3 |
| ribosome-associated protein | SAMN04488524_4342 | Not Available | Negative | 5154045 - 5154251 | 7582.48 |
| l-proline dehydrogenase | SAMN04488524_4343 | Not Available | Positive | 5154348 - 5155532 | 44747.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

