Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_4323 | Not Available | Positive | 5132275 - 5133258 | 37124.4 |
| ca-activated chloride channel family protein | SAMN04488524_4324 | Not Available | Positive | 5133245 - 5134249 | 36966.6 |
| ca-activated chloride channel family protein | SAMN04488524_4325 | Not Available | Positive | 5134254 - 5135288 | 38198.7 |
| tpr repeat-containing protein | SAMN04488524_4326 | Not Available | Positive | 5135291 - 5136043 | 28882.9 |
| oxygen tolerance | SAMN04488524_4327 | Not Available | Positive | 5136055 - 5137902 | 67902.0 |
| sh3 domain-containing protein | SAMN04488524_4328 | Not Available | Positive | 5137895 - 5138665 | 28735.8 |
| asma protein | SAMN04488524_4329 | Not Available | Positive | 5138705 - 5141788 | 114458.0 |
| protein of unknown function | SAMN04488524_4330 | Not Available | Negative | 5141795 - 5142283 | 18084.2 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | SAMN04488524_4331 | Not Available | Positive | 5142404 - 5143018 | 23524.9 |
| Tmrna,resume consensus sequence (at 89): tataattggcgaaaataa | Not Available | Not Available | Positive | 5143479 - 5143843 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

