Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN04488524_4313 | Not Available | Negative | 5117213 - 5118535 | 49816.5 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN04488524_4314 | Not Available | Positive | 5118614 - 5119024 | 15598.4 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN04488524_4315 | Not Available | Positive | 5119040 - 5120746 | 65771.0 |
| transcriptional regulator, arac family | SAMN04488524_4316 | Not Available | Negative | 5120750 - 5121697 | 36202.1 |
| excinuclease abc, a subunit | SAMN04488524_4317 | Not Available | Positive | 5121886 - 5124165 | 83651.5 |
| outer membrane protein tolc | SAMN04488524_4318 | Not Available | Positive | 5124179 - 5125504 | 49565.4 |
| rnd family efflux transporter, mfp subunit | SAMN04488524_4319 | Not Available | Positive | 5125524 - 5126624 | 39890.0 |
| multidrug efflux pump subunit acrb | SAMN04488524_4320 | Not Available | Positive | 5126645 - 5130019 | 125093.0 |
| moxr-like atpase | SAMN04488524_4321 | Not Available | Positive | 5130364 - 5131392 | 38523.0 |
| protein of unknown function duf58 | SAMN04488524_4322 | Not Available | Positive | 5131395 - 5132270 | 33641.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

