Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_4283 | Not Available | Positive | 5084866 - 5086884 | 76418.1 |
| fkbp-type peptidyl prolyl cis-trans isomerase /apo-metallochaperone slyd | SAMN04488524_4284 | Not Available | Positive | 5086892 - 5087392 | 18016.1 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN04488524_4285 | Not Available | Negative | 5087389 - 5087808 | 15990.3 |
| hypothetical protein | SAMN04488524_4286 | Not Available | Negative | 5087819 - 5088259 | 16086.1 |
| putative abc transport system permease protein | SAMN04488524_4287 | Not Available | Negative | 5088287 - 5089510 | 44593.2 |
| putative abc transport system atp-binding protein | SAMN04488524_4288 | Not Available | Negative | 5089507 - 5090136 | 22853.4 |
| merc mercury resistance protein | SAMN04488524_4289 | Not Available | Negative | 5090369 - 5090749 | 13599.0 |
| atpase components of abc transporters with duplicated atpase domains | SAMN04488524_4290 | Not Available | Negative | 5090907 - 5092532 | 61427.1 |
| hypothetical protein | SAMN04488524_4291 | Not Available | Positive | 5092601 - 5093170 | 21945.0 |
| nitroreductase | SAMN04488524_4292 | Not Available | Positive | 5093230 - 5093835 | 23194.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

