Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_4263 | Not Available | Negative | 5061699 - 5064509 | 107192.0 |
| threonine/homoserine efflux transporter rhta | SAMN04488524_4264 | Not Available | Negative | 5064963 - 5065856 | 33170.6 |
| lipopolysaccharide export system permease protein | SAMN04488524_4265 | Not Available | Negative | 5065858 - 5066961 | 41941.4 |
| queuine trna-ribosyltransferase | SAMN04488524_4266 | Not Available | Negative | 5066962 - 5068092 | 42412.2 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04488524_4267 | Not Available | Positive | 5068245 - 5069402 | 44325.9 |
| 16s rrna m(7)g-527 methyltransferase | SAMN04488524_4268 | Not Available | Positive | 5069393 - 5070025 | 23909.9 |
| blar1 peptidase m56 | SAMN04488524_4269 | Not Available | Negative | 5070038 - 5071189 | 44031.2 |
| predicted transcriptional regulator | SAMN04488524_4270 | Not Available | Negative | 5071189 - 5071557 | 14285.4 |
| dna processing protein | SAMN04488524_4271 | Not Available | Positive | 5071707 - 5072801 | 40067.9 |
| cystathionine beta-synthase | SAMN04488524_4272 | Not Available | Positive | 5072953 - 5074314 | 50073.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

