Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted n-acyltransferase, gnat family | SAMN04488524_4253 | Not Available | Positive | 5050933 - 5051358 | 16223.6 |
| hydroxymethylglutaryl-coa lyase | SAMN04488524_4254 | Not Available | Negative | 5051355 - 5052218 | 31868.1 |
| nadh dehydrogenase | SAMN04488524_4255 | Not Available | Negative | 5052196 - 5053521 | 48822.2 |
| secd/secf fusion protein | SAMN04488524_4256 | Not Available | Negative | 5053604 - 5056576 | 107661.0 |
| dihydrofolate reductase | SAMN04488524_4257 | Not Available | Negative | 5056690 - 5057175 | 18176.9 |
| thymidylate synthase | SAMN04488524_4258 | Not Available | Negative | 5057172 - 5057966 | 30297.3 |
| hypothetical protein | SAMN04488524_4259 | Not Available | Negative | 5058115 - 5058933 | 30039.6 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMN04488524_4260 | Not Available | Positive | 5059300 - 5060103 | 29041.0 |
| o-succinylhomoserine sulfhydrylase | SAMN04488524_4261 | Not Available | Positive | 5060178 - 5061344 | 42879.4 |
| protein of unknown function | SAMN04488524_4262 | Not Available | Negative | 5061426 - 5061695 | 10285.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

