Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488524_0391 | Not Available | Negative | 533848 - 535236 | 51811.2 |
| protein of unknown function | SAMN04488524_0392 | Not Available | Negative | 535247 - 536173 | 34233.4 |
| starch-binding associating with outer membrane | SAMN04488524_0393 | Not Available | Negative | 536197 - 538008 | 66703.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_0394 | Not Available | Negative | 538020 - 541205 | 116669.0 |
| fad dependent oxidoreductase | SAMN04488524_0395 | Not Available | Negative | 541242 - 543101 | 68392.8 |
| predicted protein | SAMN04488524_0396 | Not Available | Negative | 543107 - 544126 | 35737.1 |
| hexosaminidase | SAMN04488524_0397 | Not Available | Negative | 544242 - 546182 | 72401.4 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN04488524_0398 | Not Available | Positive | 546331 - 547551 | 44301.7 |
| hypothetical protein | SAMN04488524_0399 | Not Available | Negative | 547575 - 548768 | 43025.4 |
| s-formylglutathione hydrolase frmb | SAMN04488524_0400 | Not Available | Negative | 548789 - 549616 | 31525.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

