Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted acyltransferase | SAMN04488524_4233 | Not Available | Positive | 5033956 - 5035077 | 41795.3 |
| protein of unknown function | SAMN04488524_4234 | Not Available | Negative | 5035145 - 5035468 | 12891.9 |
| atp-binding cassette, subfamily b | SAMN04488524_4235 | Not Available | Negative | 5035537 - 5037327 | 68032.1 |
| leucine dehydrogenase | SAMN04488524_4236 | Not Available | Positive | 5037440 - 5038528 | 38902.0 |
| nusb antitermination factor | SAMN04488524_4237 | Not Available | Positive | 5038562 - 5039512 | 36699.4 |
| protein of unknown function | SAMN04488524_4238 | Not Available | Positive | 5039514 - 5039978 | 16097.9 |
| preprotein translocase subunit yajc | SAMN04488524_4239 | Not Available | Positive | 5040005 - 5040334 | 11868.9 |
| ybbr-like protein | SAMN04488524_4240 | Not Available | Positive | 5040351 - 5041358 | 38852.9 |
| dephospho-coa kinase | SAMN04488524_4241 | Not Available | Positive | 5041358 - 5041954 | 21700.4 |
| putative mrna 3-end processing factor | SAMN04488524_4242 | Not Available | Positive | 5041951 - 5042892 | 35747.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

