Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN04488524_4222 | Not Available | Positive | 5018600 - 5019997 | 51398.1 |
| thioredoxin-like | SAMN04488524_4223 | Not Available | Positive | 5020014 - 5021204 | 45021.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_4224 | Not Available | Positive | 5021213 - 5021920 | 26240.8 |
| fecr family protein | SAMN04488524_4225 | Not Available | Positive | 5022057 - 5023193 | 41514.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_4226 | Not Available | Positive | 5023365 - 5026766 | 127482.0 |
| susd family protein | SAMN04488524_4227 | Not Available | Positive | 5026771 - 5028186 | 53874.0 |
| protein of unknown function | SAMN04488524_4228 | Not Available | Positive | 5028199 - 5028963 | 29614.4 |
| pkd-like family protein | SAMN04488524_4229 | Not Available | Positive | 5028987 - 5030648 | 60821.3 |
| poly(3-hydroxybutyrate) depolymerase | SAMN04488524_4230 | Not Available | Positive | 5030671 - 5032449 | 65188.2 |
| thioredoxin | SAMN04488524_4231 | Not Available | Positive | 5032460 - 5033668 | 45598.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

