Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor proteins, mostly fe transport | SAMN04488524_4212 | Not Available | Positive | 5001547 - 5004369 | 105524.0 |
| rna polymerase, sigma subunit, ecf family | SAMN04488524_4213 | Not Available | Positive | 5004545 - 5005138 | 22253.9 |
| fecr family protein | SAMN04488524_4214 | Not Available | Positive | 5005196 - 5006377 | 43014.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_4215 | Not Available | Positive | 5006508 - 5010095 | 134694.0 |
| susd family protein | SAMN04488524_4216 | Not Available | Positive | 5010107 - 5011558 | 55112.0 |
| hypothetical protein | SAMN04488524_4217 | Not Available | Positive | 5011560 - 5012492 | 36453.1 |
| hypothetical protein | SAMN04488524_4218 | Not Available | Positive | 5012609 - 5012992 | 13979.8 |
| rna polymerase sigma-70 factor, bacteroides expansion family 1 | SAMN04488524_4219 | Not Available | Positive | 5013107 - 5013691 | 23002.0 |
| fecr family protein | SAMN04488524_4220 | Not Available | Positive | 5013786 - 5014931 | 41859.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_4221 | Not Available | Positive | 5015164 - 5018598 | 125846.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

