Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN04488524_4172 | Not Available | Positive | 4950036 - 4951385 | 51068.3 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488524_4173 | Not Available | Positive | 4951405 - 4952637 | 47151.8 |
| enoyl-[acyl-carrier-protein] reductase | SAMN04488524_4174 | Not Available | Positive | 4952771 - 4953583 | 28175.9 |
| pap2 superfamily protein | SAMN04488524_4175 | Not Available | Positive | 4953639 - 4954385 | 27374.1 |
| cobalt-zinc-cadmium resistance protein czca | SAMN04488524_4176 | Not Available | Negative | 4954382 - 4957513 | 115418.0 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN04488524_4177 | Not Available | Negative | 4957535 - 4958629 | 40537.8 |
| outer membrane protein, cobalt-zinc-cadmium efflux system | SAMN04488524_4178 | Not Available | Negative | 4958635 - 4959903 | 48269.9 |
| signal transduction histidine kinase | SAMN04488524_4179 | Not Available | Negative | 4959962 - 4961320 | 51579.4 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488524_4180 | Not Available | Negative | 4961326 - 4962003 | 25689.3 |
| inosose dehydratase | SAMN04488524_4181 | Not Available | Negative | 4962063 - 4962968 | 32744.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

