Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine cyclo-ligase | SAMN04488524_0381 | Not Available | Positive | 521853 - 523034 | 42891.9 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488524_0382 | Not Available | Negative | 523094 - 524527 | 52959.1 |
| lysophospholipase l1 | SAMN04488524_0383 | Not Available | Negative | 524524 - 525408 | 33226.4 |
| dipeptidyl-peptidase 7. serine peptidase. merops family s46 | SAMN04488524_0384 | Not Available | Negative | 525755 - 527938 | 81598.2 |
| hypothetical protein | SAMN04488524_0385 | Not Available | Negative | 527985 - 528851 | 32661.8 |
| n-acylglucosamine 2-epimerase | SAMN04488524_0386 | Not Available | Negative | 528980 - 530206 | 48085.4 |
| protein of unknown function | SAMN04488524_0387 | Not Available | Negative | 530214 - 531152 | 36288.9 |
| lysophospholipase l1 | SAMN04488524_0388 | Not Available | Negative | 531149 - 531853 | 26748.3 |
| lysophospholipase l1 | SAMN04488524_0389 | Not Available | Negative | 531843 - 532544 | 25853.9 |
| mfs transporter, pat family, beta-lactamase induction signal transducer ampg | SAMN04488524_0390 | Not Available | Negative | 532541 - 533830 | 47689.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

