Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_4130 | Not Available | Positive | 4897601 - 4898176 | 22267.7 |
| fecr family protein | SAMN04488524_4131 | Not Available | Positive | 4898253 - 4899392 | 41782.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_4132 | Not Available | Positive | 4899693 - 4903121 | 124581.0 |
| susd family protein | SAMN04488524_4133 | Not Available | Positive | 4903140 - 4904588 | 54024.4 |
| hypothetical protein | SAMN04488524_4134 | Not Available | Positive | 4904627 - 4905238 | 21642.8 |
| hypothetical protein | SAMN04488524_4135 | Not Available | Negative | 4905436 - 4906530 | 39910.8 |
| hypothetical protein | SAMN04488524_4136 | Not Available | Positive | 4906630 - 4907115 | 17916.0 |
| uncharacterized membrane protein | SAMN04488524_4137 | Not Available | Negative | 4907112 - 4907825 | 26679.4 |
| hypothetical protein | SAMN04488524_4138 | Not Available | Negative | 4907828 - 4908091 | 10075.8 |
| hypothetical protein | SAMN04488524_4139 | Not Available | Positive | 4908220 - 4908675 | 18339.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

