Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system atp-binding protein | SAMN04488524_4120 | Not Available | Positive | 4881631 - 4882569 | 34735.9 |
| abc-2 type transport system permease protein | SAMN04488524_4121 | Not Available | Positive | 4882572 - 4884779 | 82258.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_4122 | Not Available | Positive | 4885058 - 4885612 | 21770.6 |
| fecr family protein | SAMN04488524_4123 | Not Available | Positive | 4885693 - 4886688 | 38307.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_4124 | Not Available | Positive | 4886834 - 4890310 | 126864.0 |
| starch-binding associating with outer membrane | SAMN04488524_4125 | Not Available | Positive | 4890334 - 4892175 | 67454.2 |
| protein of unknown function | SAMN04488524_4126 | Not Available | Positive | 4892202 - 4893167 | 35012.5 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488524_4127 | Not Available | Positive | 4893304 - 4894680 | 51014.6 |
| magnesium transporter | SAMN04488524_4128 | Not Available | Positive | 4894790 - 4896163 | 50786.4 |
| subtilase family protein | SAMN04488524_4129 | Not Available | Positive | 4896257 - 4897591 | 48699.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

