Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_4110 | Not Available | Negative | 4869043 - 4869573 | 19881.6 |
| nte family protein | SAMN04488524_4111 | Not Available | Negative | 4869570 - 4871873 | 87017.2 |
| hypothetical protein | SAMN04488524_4112 | Not Available | Negative | 4871922 - 4872659 | 26711.1 |
| pas domain s-box-containing protein | SAMN04488524_4113 | Not Available | Negative | 4872662 - 4873633 | 36869.6 |
| protein of unknown function | SAMN04488524_4114 | Not Available | Positive | 4873722 - 4874237 | 18540.4 |
| Trna-arg | Not Available | Not Available | Positive | 4874282 - 4874356 | Not Available |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_4116 | Not Available | Positive | 4874764 - 4875342 | 22539.1 |
| fecr family protein | SAMN04488524_4117 | Not Available | Positive | 4875408 - 4876556 | 42935.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_4118 | Not Available | Positive | 4876610 - 4880161 | 132643.0 |
| susd family protein | SAMN04488524_4119 | Not Available | Positive | 4880166 - 4881605 | 54566.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

