Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_4070 | Not Available | Negative | 4821271 - 4821567 | 10881.7 |
| predicted purr-regulated permease perm | SAMN04488524_4071 | Not Available | Negative | 4821573 - 4822685 | 41743.0 |
| predicted oxidoreductase | SAMN04488524_4072 | Not Available | Negative | 4822745 - 4823698 | 35415.9 |
| trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmc | SAMN04488524_4073 | Not Available | Negative | 4823749 - 4824429 | 25352.7 |
| predicted dna-binding protein, mmcq/yjbr family | SAMN04488524_4074 | Not Available | Positive | 4824480 - 4824815 | 12762.5 |
| photosynthetic reaction center cytochrome c subunit | SAMN04488524_4075 | Not Available | Positive | 4825121 - 4825519 | 14923.3 |
| putative endopeptidase | SAMN04488524_4076 | Not Available | Negative | 4825625 - 4827661 | 76089.8 |
| hypothetical protein | SAMN04488524_4077 | Not Available | Positive | 4827738 - 4827875 | 5390.81 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04488524_4078 | Not Available | Negative | 4827901 - 4828773 | 32339.6 |
| dipeptidyl-peptidase-4 | SAMN04488524_4079 | Not Available | Positive | 4828876 - 4831038 | 81089.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

