Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_4060 | Not Available | Negative | 4808674 - 4808886 | 8033.5 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN04488524_4061 | Not Available | Negative | 4808902 - 4810176 | 47249.5 |
| lipoprotein-releasing system permease protein | SAMN04488524_4062 | Not Available | Positive | 4810257 - 4811477 | 46004.5 |
| prolyl oligopeptidase family protein | SAMN04488524_4063 | Not Available | Negative | 4811488 - 4813896 | 88993.3 |
| hypothetical protein | SAMN04488524_4064 | Not Available | Negative | 4813977 - 4814921 | 34253.7 |
| signal transduction histidine kinase | SAMN04488524_4065 | Not Available | Negative | 4814993 - 4817356 | 88686.8 |
| phnb protein | SAMN04488524_4066 | Not Available | Negative | 4817559 - 4817990 | 16043.2 |
| transcriptional regulator, arac family with amidase-like domain | SAMN04488524_4067 | Not Available | Positive | 4818122 - 4819105 | 36917.6 |
| atp-dependent rna helicase rhle | SAMN04488524_4068 | Not Available | Positive | 4819128 - 4820456 | 49033.8 |
| xtp/ditp diphosphohydrolase | SAMN04488524_4069 | Not Available | Negative | 4820453 - 4821259 | 30875.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

