Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate mutase | SAMN04488524_4040 | Not Available | Negative | 4786993 - 4788513 | 55762.1 |
| protein of unknown function | SAMN04488524_4041 | Not Available | Positive | 4788619 - 4789044 | 16145.7 |
| nicotinate-nucleotide pyrophosphorylase | SAMN04488524_4042 | Not Available | Positive | 4789081 - 4789923 | 30527.9 |
| glycerol-3-phosphate acyltransferase plsy | SAMN04488524_4043 | Not Available | Positive | 4789927 - 4790574 | 23150.0 |
| peptidase family m48 | SAMN04488524_4044 | Not Available | Positive | 4790586 - 4791407 | 29508.5 |
| para-aminobenzoate synthetase component 1 | SAMN04488524_4045 | Not Available | Negative | 4791440 - 4792693 | 46626.0 |
| adenylosuccinate synthetase | SAMN04488524_4046 | Not Available | Negative | 4792762 - 4794039 | 46713.3 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN04488524_4047 | Not Available | Negative | 4794074 - 4794568 | 19080.8 |
| gtp pyrophosphokinase | SAMN04488524_4048 | Not Available | Negative | 4794632 - 4796839 | 83671.3 |
| protein of unknown function | SAMN04488524_4049 | Not Available | Positive | 4797025 - 4797711 | 26336.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

