Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_4018 | Not Available | Negative | 4763039 - 4763224 | 6392.87 |
| signal transduction histidine kinase | SAMN04488524_4019 | Not Available | Negative | 4763314 - 4764624 | 50070.0 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488524_4020 | Not Available | Negative | 4764649 - 4765326 | 26068.5 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04488524_4021 | Not Available | Negative | 4765403 - 4766809 | 51541.1 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN04488524_4022 | Not Available | Negative | 4766820 - 4769993 | 114396.0 |
| membrane fusion protein, multidrug efflux system | SAMN04488524_4023 | Not Available | Negative | 4770000 - 4771169 | 41767.0 |
| transcriptional regulator, tetr family | SAMN04488524_4024 | Not Available | Negative | 4771194 - 4771781 | 22924.7 |
| cytidylate kinase | SAMN04488524_4025 | Not Available | Negative | 4771904 - 4772581 | 25541.3 |
| transcriptional regulator, laci family | SAMN04488524_4026 | Not Available | Negative | 4772692 - 4773729 | 39095.2 |
| mfs transporter, fhs family, l-fucose permease | SAMN04488524_4027 | Not Available | Negative | 4773738 - 4774970 | 44649.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

