Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transport protein exbd | SAMN04488524_4008 | Not Available | Negative | 4749081 - 4749482 | 14908.4 |
| outer membrane transport energization protein exbb | SAMN04488524_4009 | Not Available | Negative | 4749482 - 4750195 | 25967.7 |
| sporulation related domain-containing protein | SAMN04488524_4010 | Not Available | Negative | 4750198 - 4751556 | 49954.8 |
| tonb dependent receptor | SAMN04488524_4011 | Not Available | Negative | 4751613 - 4753316 | 63047.1 |
| tetratricopeptide repeat-containing protein | SAMN04488524_4012 | Not Available | Negative | 4753328 - 4756345 | 115487.0 |
| aspartate carbamoyltransferase | SAMN04488524_4013 | Not Available | Negative | 4756516 - 4757448 | 34406.1 |
| pyrimidine operon attenuation protein / uracil phosphoribosyltransferase | SAMN04488524_4014 | Not Available | Negative | 4757450 - 4757998 | 20957.4 |
| hexosaminidase | SAMN04488524_4015 | Not Available | Negative | 4758110 - 4759726 | 61699.2 |
| ssu ribosomal protein s1p | SAMN04488524_4016 | Not Available | Negative | 4759813 - 4761747 | 71620.0 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN04488524_4017 | Not Available | Negative | 4761949 - 4762923 | 36359.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

