Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette, subfamily b | SAMN04488524_3976 | Not Available | Negative | 4700252 - 4702012 | 65175.5 |
| atp-binding cassette, subfamily b | SAMN04488524_3977 | Not Available | Negative | 4701996 - 4703699 | 62006.2 |
| predicted dehydrogenase | SAMN04488524_3978 | Not Available | Negative | 4703692 - 4704738 | 38610.5 |
| hypothetical protein | SAMN04488524_3979 | Not Available | Positive | 4704962 - 4705540 | 20036.0 |
| transporter, sss family | SAMN04488524_3980 | Not Available | Negative | 4705612 - 4707291 | 61250.7 |
| fad dependent oxidoreductase | SAMN04488524_3981 | Not Available | Negative | 4707295 - 4709592 | 85915.1 |
| hypothetical protein | SAMN04488524_3982 | Not Available | Negative | 4709609 - 4712440 | 106777.0 |
| alpha-glucosidase | SAMN04488524_3983 | Not Available | Negative | 4712447 - 4714336 | 70361.8 |
| lysophospholipase l1 | SAMN04488524_3984 | Not Available | Negative | 4714333 - 4715694 | 49801.9 |
| hypothetical protein | SAMN04488524_3985 | Not Available | Negative | 4715681 - 4719091 | 127731.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

