Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN04488524_3956 | Not Available | Positive | 4667935 - 4669719 | 65634.5 |
| hypothetical protein | SAMN04488524_3957 | Not Available | Negative | 4669731 - 4670477 | 28063.5 |
| sialate o-acetylesterase | SAMN04488524_3958 | Not Available | Negative | 4670560 - 4671957 | 51307.8 |
| predicted arabinose efflux permease, mfs family | SAMN04488524_3959 | Not Available | Negative | 4672036 - 4673280 | 45652.6 |
| hypothetical protein | SAMN04488524_3960 | Not Available | Negative | 4673309 - 4674328 | 36177.3 |
| n-acetylneuraminate lyase | SAMN04488524_3961 | Not Available | Negative | 4674358 - 4675281 | 33279.5 |
| sialidase-1 | SAMN04488524_3962 | Not Available | Negative | 4675316 - 4676968 | 60774.9 |
| bnr repeat-like domain-containing protein | SAMN04488524_3963 | Not Available | Negative | 4676988 - 4678949 | 71238.2 |
| starch-binding associating with outer membrane | SAMN04488524_3964 | Not Available | Negative | 4678940 - 4680451 | 57277.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_3965 | Not Available | Negative | 4680499 - 4683270 | 102441.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

