Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | SAMN04488524_3946 | Not Available | Negative | 4651222 - 4652805 | 59574.7 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488524_3947 | Not Available | Negative | 4652872 - 4654419 | 59312.7 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488524_3948 | Not Available | Negative | 4654793 - 4655938 | 43168.9 |
| disulphide bond corrector protein dsbc | SAMN04488524_3949 | Not Available | Negative | 4655974 - 4657905 | 73550.2 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488524_3950 | Not Available | Negative | 4657907 - 4659448 | 57123.2 |
| susd family protein | SAMN04488524_3951 | Not Available | Negative | 4659511 - 4661049 | 58854.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_3952 | Not Available | Negative | 4661061 - 4664684 | 134871.0 |
| fecr family protein | SAMN04488524_3953 | Not Available | Negative | 4664807 - 4666015 | 45698.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_3954 | Not Available | Positive | 4666150 - 4666740 | 22710.4 |
| hypothetical protein | SAMN04488524_3955 | Not Available | Positive | 4666994 - 4667851 | 32414.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

