Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase family m48 | SAMN04488524_0359 | Not Available | Negative | 495533 - 496339 | 29364.8 |
| histidine kinase | SAMN04488524_0360 | Not Available | Positive | 496501 - 498441 | 72806.1 |
| two component transcriptional regulator, luxr family | SAMN04488524_0361 | Not Available | Positive | 498451 - 499065 | 22818.3 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04488524_0363 | Not Available | Negative | 499590 - 500435 | 32563.1 |
| dna-binding transcriptional regulator, arsr family | SAMN04488524_0364 | Not Available | Negative | 500441 - 500836 | 15464.9 |
| Trna-his | Not Available | Not Available | Positive | 501452 - 501525 | Not Available |
| ribonuclease hi | SAMN04488524_0367 | Not Available | Positive | 501665 - 502177 | 19159.3 |
| fructose-1,6-bisphosphatase i | SAMN04488524_0368 | Not Available | Negative | 502174 - 503223 | 37880.3 |
| hypothetical protein | SAMN04488524_0369 | Not Available | Negative | 503246 - 503737 | 18512.3 |
| trna1val (adenine37-n6)-methyltransferase | SAMN04488524_0370 | Not Available | Negative | 503747 - 504451 | 26076.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

