Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr01666 family membrane protein | SAMN04488524_3896 | Not Available | Positive | 4588497 - 4590656 | 82400.9 |
| peroxiredoxin, ohr subfamily | SAMN04488524_3897 | Not Available | Positive | 4590733 - 4591143 | 14483.9 |
| biotin synthase | SAMN04488524_3898 | Not Available | Negative | 4591140 - 4592150 | 37277.7 |
| magnesium transporter | SAMN04488524_3899 | Not Available | Negative | 4592164 - 4593513 | 49822.9 |
| magnesium transporter | SAMN04488524_3900 | Not Available | Negative | 4593542 - 4594660 | 43529.9 |
| wbqc-like protein family protein | SAMN04488524_3901 | Not Available | Negative | 4594664 - 4595275 | 24696.5 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN04488524_3902 | Not Available | Positive | 4595314 - 4596198 | 34968.6 |
| hypothetical protein | SAMN04488524_3903 | Not Available | Positive | 4596195 - 4597214 | 38913.8 |
| peptidase family m28 | SAMN04488524_3904 | Not Available | Negative | 4597211 - 4598179 | 35085.5 |
| 3-dehydroquinate dehydratase | SAMN04488524_3905 | Not Available | Negative | 4598182 - 4598601 | 15323.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

