Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spou rrna methylase family protein | SAMN04488524_3876 | Not Available | Negative | 4567219 - 4567749 | 19614.7 |
| galactokinase | SAMN04488524_3877 | Not Available | Negative | 4567765 - 4568916 | 42369.9 |
| aldose 1-epimerase | SAMN04488524_3878 | Not Available | Positive | 4569142 - 4570179 | 38747.4 |
| predicted dithiol-disulfide isomerase, dsba family | SAMN04488524_3879 | Not Available | Positive | 4570179 - 4570823 | 24142.7 |
| ribosomal protein s18 acetylase rimi | SAMN04488524_3880 | Not Available | Positive | 4570990 - 4571451 | 17467.1 |
| dinb superfamily protein | SAMN04488524_3881 | Not Available | Positive | 4571795 - 4572304 | 19087.8 |
| protein of unknown function | SAMN04488524_3882 | Not Available | Positive | 4572385 - 4572984 | 23067.0 |
| hypothetical protein | SAMN04488524_3883 | Not Available | Positive | 4573021 - 4573218 | 7450.79 |
| hypothetical protein | SAMN04488524_3884 | Not Available | Negative | 4573229 - 4574167 | 33650.1 |
| tonb-dependent receptor plug domain | SAMN04488524_3885 | Not Available | Negative | 4574252 - 4577188 | 107601.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

