Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_3855 | Not Available | Negative | 4547995 - 4548600 | 22490.0 |
| bnr repeat-like domain-containing protein | SAMN04488524_3856 | Not Available | Positive | 4548780 - 4550072 | 49025.1 |
| hypothetical protein | SAMN04488524_3857 | Not Available | Negative | 4550093 - 4550425 | 12979.5 |
| hypothetical protein | SAMN04488524_3858 | Not Available | Negative | 4550425 - 4550703 | 10510.9 |
| transcriptional regulator, arac family | SAMN04488524_3859 | Not Available | Positive | 4550848 - 4551753 | 33501.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488524_3860 | Not Available | Negative | 4551761 - 4552516 | 26735.9 |
| arac-type dna-binding protein | SAMN04488524_3861 | Not Available | Negative | 4552571 - 4552975 | 15460.3 |
| transcriptional regulator, arsr family | SAMN04488524_3862 | Not Available | Positive | 4553153 - 4553473 | 12333.0 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04488524_3863 | Not Available | Positive | 4553475 - 4553939 | 18120.0 |
| doxx-like family protein | SAMN04488524_3864 | Not Available | Positive | 4553946 - 4554332 | 14365.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

