Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional attenuator, lytr family | SAMN04488524_3814 | Not Available | Positive | 4507590 - 4508531 | 34236.3 |
| hypothetical protein | SAMN04488524_3815 | Not Available | Positive | 4508642 - 4508950 | 11054.2 |
| chaperone of endosialidase | SAMN04488524_3816 | Not Available | Positive | 4509030 - 4509464 | 16086.5 |
| adenylate cyclase | SAMN04488524_3817 | Not Available | Positive | 4509536 - 4510567 | 38564.3 |
| predicted oxidoreductase | SAMN04488524_3818 | Not Available | Negative | 4510582 - 4511586 | 36373.3 |
| helix-turn-helix domain-containing protein | SAMN04488524_3819 | Not Available | Negative | 4511668 - 4512576 | 34380.1 |
| starch phosphorylase | SAMN04488524_3820 | Not Available | Negative | 4512600 - 4514252 | 62220.6 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN04488524_3821 | Not Available | Negative | 4514321 - 4515478 | 43202.3 |
| arac-type dna-binding protein | SAMN04488524_3822 | Not Available | Negative | 4515509 - 4516267 | 29176.0 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN04488524_3823 | Not Available | Positive | 4516401 - 4517588 | 43769.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

